STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46753.1Exonuclease RNase T and DNA polymerase III. (299 aa)    
Predicted Functional Partners:
AEI47860.1
DNA polymerase III, beta subunit.
  
 0.995
AEI49479.1
DNA polymerase III, alpha subunit.
  
 0.995
AEI51854.1
DNA polymerase III, delta subunit.
    
 0.985
Runsl_3621
DNA polymerase III gamma/tau subunits-like protein.
  
 0.976
AEI51692.1
DNA polymerase III, subunits gamma and tau.
  
 0.976
AEI50023.1
DNA polymerase III, epsilon subunit.
  
 
0.941
AEI48914.1
UvrD/REP helicase.
  
 
 0.925
AEI47066.1
Exonuclease RNase T and DNA polymerase III.
    
 0.910
AEI51604.1
Replicative DNA helicase.
  
 
 0.789
AEI48569.1
Fmu (Sun) domain protein.
 
   0.765
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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