STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46780.1Hypothetical protein. (204 aa)    
Predicted Functional Partners:
AEI46781.1
Hypothetical protein.
       0.782
AEI46782.1
Hypothetical protein.
       0.752
AEI46778.1
Hypothetical protein.
       0.693
AEI46779.1
Hypothetical protein.
       0.693
AEI46777.1
Hypothetical protein.
       0.616
AEI49876.1
succinyl-CoA synthetase, alpha subunit.
  
    0.577
AEI50492.1
Succinyl-CoA ligase (ADP-forming) subunit beta.
  
    0.576
AEI46783.1
Hypothetical protein.
       0.458
AEI46784.1
N-6 DNA methylase.
     
 0.448
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.