STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46823.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
AEI51879.1
Hypothetical protein.
  
     0.644
AEI49554.1
Hypothetical protein.
  
     0.617
AEI49879.1
Putative membrane protein.
  
     0.550
AEI49561.1
Hypothetical protein.
  
     0.523
AEI50903.1
Protein of unknown function DUF349.
  
     0.498
AEI47862.1
Hypothetical protein.
  
     0.495
AEI49459.1
Hypothetical protein.
  
     0.492
AEI47899.1
Hypothetical protein.
  
     0.489
AEI46822.1
Peptidase S41.
       0.465
AEI49838.1
Colicin V production protein.
  
     0.454
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.