STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Runsl_0400Dipeptidylaminopeptidase/acylaminoacyl-peptidase -like protein. (316 aa)    
Predicted Functional Partners:
AEI49695.1
Glucose-inhibited division protein A.
  
     0.678
AEI49696.1
Glucose-inhibited division protein A.
  
     0.641
AEI50976.1
Membrane-bound dehydrogenase domain protein.
 
     0.634
AEI51057.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
     0.597
AEI47280.1
Membrane-bound dehydrogenase domain protein.
 
     0.553
AEI46851.1
Peptidase M20.
       0.532
AEI49992.1
Xylose isomerase domain-containing protein TIM barrel.
  
     0.526
AEI49165.1
Mannosylglycoprotein endo-beta-mannosidase.
 
     0.488
AEI49496.1
FG-GAP repeat-containing protein.
  
     0.487
AEI50570.1
Hypothetical protein.
  
     0.454
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.