STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46875.1Catalytic domain-containing protein of components of various dehydrogenase complexes. (269 aa)    
Predicted Functional Partners:
AEI49443.1
Transketolase domain-containing protein.
 
 0.992
AEI49388.1
2-oxoglutarate dehydrogenase, E1 subunit.
 
 0.961
AEI47157.1
Pyruvate dehydrogenase (acetyl-transferring).
 
 0.931
AEI47575.1
Dihydrolipoamide dehydrogenase.
 
 0.930
AEI49390.1
Dihydrolipoamide dehydrogenase.
 
 0.922
AEI51741.1
Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit.
 
 0.886
AEI46873.1
Protein of unknown function DUF1080.
       0.773
AEI46874.1
Coagulation factor 5/8 type domain protein.
       0.773
AEI50492.1
Succinyl-CoA ligase (ADP-forming) subunit beta.
  
 
 0.773
AEI51509.1
Forkhead-associated protein.
    
 
 0.758
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.