STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46914.1Putative lipase/esterase. (304 aa)    
Predicted Functional Partners:
AEI51801.1
NADH-quinone oxidoreductase, F subunit.
    
  0.702
AEI49972.1
Esterase/lipase precursor.
 
     0.673
AEI51800.1
NADH-quinone oxidoreductase, E subunit.
    
  0.651
AEI51802.1
NADH dehydrogenase (quinone).
    
 0.552
AEI46916.1
Esterase.
     0.473
AEI47107.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
  0.446
AEI46915.1
Major facilitator superfamily MFS_1.
       0.426
AEI51224.1
Glutamate synthase (NADPH).
  
 0.402
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.