STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46939.1Carboxylesterase type B. (544 aa)    
Predicted Functional Partners:
AEI46938.1
Xylose isomerase domain-containing protein TIM barrel.
 
     0.670
AEI46940.1
NUDIX hydrolase.
       0.559
AEI46937.1
Esterase.
 
     0.553
AEI47463.1
Guanylate kinase.
    
  0.547
AEI46936.1
Carboxylesterase type B.
 
    
0.510
AEI47507.1
Glutamate carboxypeptidase II.
 
  0.505
AEI47978.1
phospholipase/Carboxylesterase.
 
     0.485
AEI47754.1
Hypothetical protein.
  
     0.453
AEI48967.1
Hypothetical protein.
  
     0.411
AEI48680.1
Glucan endo-1,6-beta-glucosidase.
 
     0.405
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.