STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46943.1L-iditol 2-dehydrogenase. (337 aa)    
Predicted Functional Partners:
AEI49339.1
Xylose isomerase.
     
 0.909
AEI47620.1
Fructokinase.
  
 
 0.906
AEI47689.1
Fructokinase.
  
 
 0.906
AEI50842.1
ROK family protein.
   
 
 0.904
AEI51892.1
Alditol oxidase.
  
 
 0.904
AEI47623.1
Glycosyl hydrolase family 32 domain protein.
     
 0.903
AEI46944.1
Filamentation induced by cAMP protein Fic.
       0.773
AEI49159.1
NADPH:quinone reductase.
 
  
 0.695
AEI47383.1
ATP synthase subunit alpha.
     
 0.634
AEI46601.1
ATP synthase subunit c.
     
 0.633
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.