STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46945.1Hypothetical protein. (98 aa)    
Predicted Functional Partners:
AEI46973.1
Protocatechuate 3,4-dioxygenase, alpha subunit.
  
   
 0.671
AEI46972.1
3-carboxy-cis,cis-muconate cycloisomerase.
  
   
 0.665
AEI46971.1
3-oxoadipate enol-lactonase.
 
  
 0.621
AEI46970.1
4-hydroxybenzoate 3-monooxygenase.
  
  
 0.602
AEI46974.1
Protocatechuate 3,4-dioxygenase, beta subunit.
  
   
 0.590
AEI46915.1
Major facilitator superfamily MFS_1.
  
    0.560
AEI46935.1
citrate/H+ symporter, CitMHS family.
  
    0.534
AEI48582.1
Malonate transporter, MadM subunit.
  
     0.469
AEI47968.1
PrpF protein.
  
     0.462
AEI48583.1
Malonate transporter, MadL subunit.
  
     0.457
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.