STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46950.1Hypothetical protein. (371 aa)    
Predicted Functional Partners:
AEI46951.1
Methionine synthase vitamin-B12 independent.
       0.727
AEI51801.1
NADH-quinone oxidoreductase, F subunit.
   
 
 0.721
AEI47381.1
ADP-heptose:LPS heptosyltransferase-like protein.
  
     0.708
AEI51802.1
NADH dehydrogenase (quinone).
   
 
 0.688
AEI49153.1
Hypothetical protein.
  
     0.681
AEI51800.1
NADH-quinone oxidoreductase, E subunit.
   
   0.677
AEI46926.1
Biphenyl-2,3-diol 1,2-dioxygenase.
  
     0.672
AEI47990.1
Glycosyl transferase group 1.
  
     0.631
AEI47969.1
Phosphogluconate dehydrogenase, NAD-binding protein.
  
     0.601
AEI49377.1
Conserved repeat domain protein.
  
     0.588
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.