STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46951.1Methionine synthase vitamin-B12 independent. (368 aa)    
Predicted Functional Partners:
AEI51703.1
5,10-methylenetetrahydrofolate reductase.
  
  
 0.841
AEI51025.1
Adenosylhomocysteinase.
  
 
 0.821
AEI46841.1
S-adenosylmethionine synthase.
  
 0.779
AEI51026.1
S-adenosylmethionine synthase.
  
 0.779
AEI51593.1
Methionine synthase.
  
  
 0.767
AEI46858.1
Aspartate kinase.
  
  
 0.745
AEI46950.1
Hypothetical protein.
       0.727
AEI51679.1
O-acetylhomoserine/O-acetylserine sulfhydrylase.
  
 
 0.628
AEI46952.1
3-hydroxy-2-methylbutyryl-CoA dehydrogenase.
       0.610
AEI46972.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
  
 0.544
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.