STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI46955.1Enoyl-CoA hydratase/isomerase. (251 aa)    
Predicted Functional Partners:
AEI51396.1
3-hydroxyacyl-CoA dehydrogenase.
 0.948
AEI46954.1
Long-chain-fatty-acid--CoA ligase.
 
 
 0.947
AEI47551.1
Hypothetical protein.
     
  0.900
AEI51593.1
Methionine synthase.
     
 0.816
AEI51025.1
Adenosylhomocysteinase.
    
 0.804
AEI51679.1
O-acetylhomoserine/O-acetylserine sulfhydrylase.
   
 
  0.803
AEI48543.1
Cys/Met metabolism pyridoxal-phosphate-dependent protein.
   
 
 0.801
AEI50660.1
Cystathionine gamma-lyase.
   
 
 0.801
AEI50959.1
Cystathionine beta-lyase.
     
  0.800
AEI51109.1
Methionine synthase vitamin-B12 independent.
     
  0.800
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.