STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Runsl_0537Quinoprotein glucose dehydrogenase. (1134 aa)    
Predicted Functional Partners:
AEI49200.1
Quinoprotein glucose dehydrogenase.
  
 
 0.935
AEI51783.1
Quinoprotein glucose dehydrogenase.
  
 
 0.927
AEI51827.1
SMP-30/Gluconolaconase/LRE-like region-containing protein.
 
  
  0.924
AEI46647.1
SMP-30/Gluconolaconase/LRE-like region-containing protein.
 
  
  0.912
AEI49654.1
SMP-30/Gluconolaconase/LRE-like region-containing protein.
    
  0.900
AEI50222.1
Gluconolactonase.
    
  0.900
AEI51741.1
Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit.
   
 
  0.827
AEI51223.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
  
 
  0.811
AEI50896.1
Glyceraldehyde-3-phosphate dehydrogenase, type I.
    
 0.809
AEI50870.1
Enolase.
   
 
  0.808
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.