STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI46994.1Hypothetical protein. (466 aa)    
Predicted Functional Partners:
AEI46993.1
Hypothetical protein.
       0.773
AEI47496.1
Hypothetical protein.
  
     0.753
AEI46992.1
Beta-lactamase.
       0.741
AEI50530.1
SMC domain protein.
 
     0.717
AEI50529.1
Hypothetical protein.
  
     0.689
AEI50016.1
SMC domain protein.
 
     0.554
AEI47572.1
Hypothetical protein.
  
     0.522
AEI49304.1
SMC domain protein.
 
     0.508
AEI46468.1
Hypothetical protein.
  
     0.507
AEI50169.1
AAA ATPase.
  
     0.506
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.