STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47043.1Pyridoxine 5'-phosphate synthase. (238 aa)    
Predicted Functional Partners:
AEI50904.1
Pyridoxine/pyridoxamine 5'-phosphate oxidase.
  
  
 0.933
AEI51394.1
4-hydroxythreonine-4-phosphate dehydrogenase.
 
 
 0.916
AEI47262.1
1-deoxy-D-xylulose-5-phosphate synthase.
     
 0.634
AEI47044.1
Endoribonuclease L-PSP.
     
 0.600
AEI48154.1
GTP-binding protein Era-like-protein.
    
 0.569
AEI47030.1
GMP synthase (glutamine-hydrolyzing).
 
   
 0.531
AEI48513.1
GTP cyclohydrolase-2.
     
 0.531
AEI50136.1
Phosphopantetheine adenylyltransferase.
  
   
 0.519
AEI51592.1
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein.
     
  0.500
AEI47042.1
Esterase.
       0.479
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.