STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47048.1Hypothetical protein. (581 aa)    
Predicted Functional Partners:
AEI47047.1
Acyltransferase 3.
       0.773
AEI51086.1
Hypothetical protein.
  
     0.722
AEI46539.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
    0.652
AEI46538.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
    0.647
AEI47335.1
Putative membrane protein.
  
    0.623
AEI46635.1
Methyltransferase type 12.
  
     0.594
AEI49398.1
Hypothetical protein.
  
 
   0.556
AEI51708.1
Methyltransferase type 11.
  
     0.539
AEI48431.1
Hypothetical protein.
  
     0.532
AEI47049.1
Hypothetical protein.
       0.528
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.