STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47049.1Hypothetical protein. (243 aa)    
Predicted Functional Partners:
AEI47041.1
Glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)-like protein.
 
     0.784
AEI50960.1
ATP-dependent carboxylate-amine ligase domain-containing protein.
 
     0.727
AEI49463.1
Hypothetical protein.
 
     0.724
AEI47707.1
Esterase.
 
     0.717
AEI49334.1
Esterase.
 
     0.710
AEI49462.1
Hypothetical protein.
 
     0.686
AEI47040.1
Carboxylate-amine ligase ybdK.
 
     0.541
AEI47050.1
Na+/solute symporter.
       0.530
AEI47047.1
Acyltransferase 3.
       0.528
AEI47048.1
Hypothetical protein.
       0.528
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.