STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47056.1Glycerophosphoryl diester phosphodiesterase. (281 aa)    
Predicted Functional Partners:
AEI49144.1
Glycerophosphoryl diester phosphodiesterase.
 
 
  0.949
AEI49142.1
Glycerophosphoryl diester phosphodiesterase.
  
  
  0.940
AEI51438.1
Glycerophosphoryl diester phosphodiesterase.
     
  0.900
AEI49039.1
Hypothetical protein.
 
      0.653
AEI46481.1
Hypothetical protein.
      0.602
AEI50099.1
Glycerol kinase.
 
  
 0.582
AEI49313.1
PHP domain protein.
      0.521
AEI47055.1
GH3 auxin-responsive promoter.
       0.519
AEI51179.1
Alkaline phosphatase.
 
  
 0.494
AEI50880.1
Glycerol-3-phosphate dehydrogenase.
 
 
 0.467
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.