STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47095.1Histidine kinase. (511 aa)    
Predicted Functional Partners:
AEI49000.1
Signal transduction histidine kinase with CheB and CheR activity.
 
0.983
AEI49491.1
Multi-sensor hybrid histidine kinase.
 
 
0.982
AEI49760.1
Response regulator receiver sensor signal transduction histidine kinase.
 
0.961
AEI47416.1
Putative PAS/PAC sensor protein.
 
 0.956
AEI49757.1
Multi-sensor hybrid histidine kinase.
 
 
0.955
AEI51397.1
Multi-sensor hybrid histidine kinase.
 
 
0.955
AEI51819.1
Multi-sensor signal transduction histidine kinase.
 
 
0.954
AEI49652.1
Multi-sensor hybrid histidine kinase.
 
 
0.952
AEI48656.1
Multi-sensor hybrid histidine kinase.
 
 
0.948
AEI47618.1
Two component transcriptional regulator, AraC family.
 
 
0.945
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: high (90%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.