STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47115.1OmpA/MotB domain protein. (668 aa)    
Predicted Functional Partners:
AEI48190.1
Hypothetical protein.
  
     0.681
AEI47335.1
Putative membrane protein.
 
     0.678
AEI49375.1
Surface antigen (D15).
 
 
 0.616
AEI47886.1
Hypothetical protein.
 
 
   0.612
AEI48633.1
Hypothetical protein.
  
   0.596
AEI47159.1
OmpA/MotB domain protein.
  
 
 0.571
AEI48634.1
Hypothetical protein.
  
   0.567
AEI50477.1
Gliding motility-associated lipoprotein GldJ.
  
    0.565
AEI50329.1
Hypothetical protein.
  
    0.562
AEI50291.1
Hypothetical protein.
  
    0.561
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.