STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47164.1Nicotinate-nucleotide adenylyltransferase. (190 aa)    
Predicted Functional Partners:
AEI48931.1
NAD+ synthetase.
  
 
 0.951
AEI48635.1
Inorganic polyphosphate/ATP-NAD kinase.
 
 
 0.941
AEI50454.1
Nicotinate-nucleotide pyrophosphorylase.
    
 0.929
AEI46640.1
NAD-dependent deacetylase.
   
 0.927
AEI49535.1
5'-nucleotidase.
     
 0.914
AEI47463.1
Guanylate kinase.
  
 0.911
AEI48178.1
Hypothetical protein.
    
 0.907
AEI49230.1
NAD(P)(+) transhydrogenase (AB-specific).
     
 0.904
AEI49231.1
Pyridine nucleotide transhydrogenase subunit alpha.
     
 0.904
AEI49232.1
NAD(P)(+) transhydrogenase (AB-specific).
     
 0.904
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.