STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47188.1Transcriptional regulator, AraC family. (280 aa)    
Predicted Functional Partners:
AEI51345.1
Transcriptional regulator, AraC family.
  
     0.744
AEI51385.1
Transcriptional regulator, AraC family.
  
     0.698
AEI47228.1
Transcriptional regulator, AraC family.
  
     0.688
AEI50180.1
Transcriptional regulator, AraC family.
  
   0.675
AEI49014.1
Transcriptional regulator with cupin sensor, AraC family.
  
     0.643
AEI51061.1
Transcriptional regulator, AraC family.
  
   0.637
AEI50692.1
Transcriptional regulator, AraC family.
  
     0.632
AEI49503.1
Transcriptional regulator, AraC family.
  
     0.613
AEI51760.1
Transcriptional regulator, AraC family.
  
     0.606
AEI50474.1
Transcriptional regulator, AraC family.
  
     0.574
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.