STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47216.1Nucleotide sugar dehydrogenase. (436 aa)    
Predicted Functional Partners:
AEI51353.1
UDP-N-acetylglucosamine 2-epimerase.
 
 0.996
AEI48589.1
UDP-N-acetylglucosamine 2-epimerase.
 
 0.994
AEI50309.1
Oxidoreductase domain protein.
 
 
 0.929
AEI51813.1
UDP-N-acetylglucosamine1- carboxyvinyltransferase.
    
  0.907
AEI47278.1
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase.
    
 0.822
AEI50995.1
UDP-glucuronate 4-epimerase.
  
 0.785
AEI47217.1
UDP-galactopyranose mutase.
       0.576
AEI47214.1
Queuine tRNA-ribosyltransferase.
       0.570
AEI47215.1
OmpA/MotB domain protein.
  
    0.567
AEI49851.1
Asparagine synthase.
 
    0.531
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.