STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47247.1Oxidoreductase domain protein. (712 aa)    
Predicted Functional Partners:
AEI47287.1
Glycosyl transferase group 1.
 
  
 0.791
AEI46660.1
Heparinase II/III family protein.
 
     0.788
AEI47383.1
ATP synthase subunit alpha.
   
 
 0.645
AEI48043.1
ATP synthase subunit beta.
   
 
 0.643
AEI46601.1
ATP synthase subunit c.
   
 
 0.638
AEI48042.1
ATPase, F1 complex, delta/epsilon subunit.
   
 
 0.613
AEI51353.1
UDP-N-acetylglucosamine 2-epimerase.
 
  
 0.597
AEI48589.1
UDP-N-acetylglucosamine 2-epimerase.
 
  
 0.589
AEI50776.1
Hypothetical protein.
  
  0.583
AEI47249.1
nucleoside:H symporter.
  
  
 0.459
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.