STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47249.1nucleoside:H symporter. (398 aa)    
Predicted Functional Partners:
AEI49289.1
Xylose isomerase domain-containing protein TIM barrel.
 
     0.751
AEI47318.1
Xylose isomerase domain-containing protein TIM barrel.
 
     0.743
AEI48829.1
Protein of unknown function DUF1080.
 
     0.636
AEI46865.1
Hypothetical protein.
 
     0.605
AEI47234.1
Hypothetical protein.
 
     0.554
AEI47248.1
Hypothetical protein.
       0.550
AEI47250.1
Exodeoxyribonuclease III Xth.
       0.506
AEI51150.1
Protein of unknown function DUF1080.
  
     0.466
AEI49888.1
Twin-arginine translocation pathway signal.
 
     0.456
AEI47247.1
Oxidoreductase domain protein.
  
  
 0.441
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.