STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47278.1acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase. (267 aa)    
Predicted Functional Partners:
AEI47277.1
(3R)-hydroxymyristoyl-(acyl-carrier- protein)dehydratase.
 
 0.999
AEI47276.1
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase.
 
0.988
AEI49832.1
lipid-A-disaccharide synthase.
 
  
 0.955
AEI51813.1
UDP-N-acetylglucosamine1- carboxyvinyltransferase.
  
 
 0.861
AEI50330.1
Tetraacyldisaccharide 4'-kinase.
 
   
 0.825
AEI47216.1
Nucleotide sugar dehydrogenase.
    
 0.822
AEI50042.1
3-deoxy-manno-octulosonate cytidylyltransferase.
 
   
 0.819
AEI49281.1
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein.
 
   
 0.816
AEI48589.1
UDP-N-acetylglucosamine 2-epimerase.
    
  0.810
AEI51353.1
UDP-N-acetylglucosamine 2-epimerase.
    
  0.810
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.