STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47281.1Cysteine synthase B. (290 aa)    
Predicted Functional Partners:
AEI50839.1
Serine O-acetyltransferase.
 
 0.996
AEI48285.1
cysteinyl-tRNA synthetase.
  
 
 0.926
AEI48543.1
Cys/Met metabolism pyridoxal-phosphate-dependent protein.
 
 0.818
AEI51457.1
thiamineS protein.
  
 
 0.801
AEI48845.1
Cystathionine beta-lyase.
 
 0.799
AEI50660.1
Cystathionine gamma-lyase.
  
 
 0.771
AEI48547.1
Sulfate adenylyltransferase, large subunit.
  
  
 0.736
AEI50980.1
Flavodoxin/nitric oxide synthase.
  
  
 0.736
AEI48939.1
Ferredoxin--nitrite reductase.
 
  
 0.635
AEI49942.1
OsmC family protein.
 
     0.577
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.