STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47332.1Outer membrane efflux protein. (448 aa)    
Predicted Functional Partners:
AEI47137.1
Outer membrane efflux protein.
  
  
  0.966
AEI47333.1
Efflux transporter, RND family, MFP subunit.
 
  0.956
AEI49450.1
Outer membrane efflux protein.
  
  
  0.929
AEI48425.1
Outer membrane efflux protein.
  
  
  0.922
AEI47570.1
Outer membrane efflux protein.
  
  
  0.918
AEI51581.1
Outer membrane efflux protein.
  
  
 
0.911
AEI48058.1
Outer membrane efflux protein.
  
  
 
0.909
AEI48561.1
Outer membrane efflux protein.
     
  0.907
AEI48218.1
RND efflux system, outer membrane lipoprotein, NodT family.
     
  0.900
AEI49208.1
RND efflux system, outer membrane lipoprotein, NodT family.
     
  0.900
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.