STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47398.1Fmu (Sun) domain protein. (398 aa)    
Predicted Functional Partners:
AEI46519.1
Methionyl-tRNA formyltransferase.
 
  
 0.891
AEI48242.1
50S ribosomal protein L10.
   
 
 0.790
AEI48107.1
Ribosomal protein L30.
   
 
 0.786
AEI48109.1
Ribosomal protein L18.
   
 
 0.763
AEI48114.1
Ribosomal protein L24.
   
   0.755
AEI48125.1
50S ribosomal protein L3.
   
   0.755
AEI48123.1
Ribosomal protein L25/L23.
   
 
 0.751
AEI48124.1
Ribosomal protein L4/L1e.
   
   0.743
AEI48120.1
Ribosomal protein L22.
   
   0.741
AEI47592.1
Ribosomal protein L13.
  
   0.740
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.