STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47400.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
AEI47401.1
Sulfite oxidase.
 
   
 0.897
AEI49607.1
Hypothetical protein.
  
     0.660
AEI47719.1
Hypothetical protein.
  
     0.611
AEI50550.1
Hypothetical protein.
  
     0.599
AEI47145.1
Rieske (2Fe-2S) iron-sulfur domain protein.
  
     0.597
AEI49922.1
Hypothetical protein.
  
     0.596
AEI50551.1
Hypothetical protein.
  
     0.574
AEI46675.1
Hypothetical protein.
  
     0.533
AEI46542.1
Hypothetical protein.
  
     0.514
AEI50691.1
Hypothetical protein.
  
     0.500
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.