STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47408.1Acriflavin resistance protein. (1158 aa)    
Predicted Functional Partners:
AEI47407.1
Efflux transporter, RND family, MFP subunit.
 
 0.965
AEI47406.1
Outer membrane efflux protein.
  0.856
AEI47139.1
Efflux transporter, RND family, MFP subunit.
 
 0.799
AEI50427.1
Efflux transporter, RND family, MFP subunit.
 0.691
AEI51917.1
Efflux transporter, RND family, MFP subunit.
 0.690
AEI47405.1
Regulatory protein TetR.
 
   
 0.634
AEI49344.1
Efflux transporter, RND family, MFP subunit.
 0.627
AEI49783.1
Efflux transporter, RND family, MFP subunit.
 
 0.613
AEI47333.1
Efflux transporter, RND family, MFP subunit.
 0.582
AEI49915.1
Efflux transporter, RND family, MFP subunit.
 
 0.558
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.