STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47463.1Guanylate kinase. (188 aa)    
Predicted Functional Partners:
AEI47030.1
GMP synthase (glutamine-hydrolyzing).
 
 
 0.963
AEI48225.1
Hypoxanthine phosphoribosyltransferase.
  
 
 0.934
AEI46611.1
Multifunctional protein surE.
  
  
  0.931
AEI49949.1
(p)ppGpp synthetase I, SpoT/RelA.
  
 
 0.931
AEI48787.1
Nucleoside diphosphate kinase.
   
 0.924
AEI51784.1
Adenylosuccinate lyase.
   
 0.922
AEI47455.1
Ribonucleoside-diphosphate reductase, alpha subunit.
    
 0.920
AEI46619.1
Ribonucleoside-diphosphate reductase.
   
 
 0.911
AEI47164.1
Nicotinate-nucleotide adenylyltransferase.
  
 0.911
AEI49535.1
5'-nucleotidase.
    
  0.903
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.