STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47492.1Hypothetical protein. (603 aa)    
Predicted Functional Partners:
AEI49561.1
Hypothetical protein.
  
     0.767
AEI51040.1
Hypothetical protein.
  
     0.765
AEI50496.1
Hypothetical protein.
  
     0.760
AEI48596.1
Hypothetical protein.
  
     0.749
AEI51251.1
Hypothetical protein.
  
     0.742
AEI47886.1
Hypothetical protein.
  
     0.739
AEI48634.1
Hypothetical protein.
  
     0.727
AEI49375.1
Surface antigen (D15).
  
     0.724
AEI48148.1
PorT-related protein.
 
     0.722
AEI48514.1
Hypothetical protein.
  
     0.717
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.