STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47564.1Multi-sensor signal transduction histidine kinase. (427 aa)    
Predicted Functional Partners:
AEI47571.1
Efflux transporter, RND family, MFP subunit.
 
     0.816
AEI47567.1
Protein of unknown function DUF214.
 
     0.796
AEI47566.1
Two component, sigma54 specific, transcriptional regulator, Fis family.
 
 
 0.790
AEI47568.1
Protein of unknown function DUF214.
 
    0.784
AEI47570.1
Outer membrane efflux protein.
 
     0.726
AEI51397.1
Multi-sensor hybrid histidine kinase.
 
 
 0.601
AEI47565.1
Hypothetical protein.
       0.565
AEI49633.1
Outer membrane protein.
 
     0.548
AEI49491.1
Multi-sensor hybrid histidine kinase.
   
 
 0.533
AEI48656.1
Multi-sensor hybrid histidine kinase.
 
 
 
 0.529
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.