STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47618.1Two component transcriptional regulator, AraC family. (906 aa)    
Predicted Functional Partners:
AEI49491.1
Multi-sensor hybrid histidine kinase.
  
 
 0.986
AEI48656.1
Multi-sensor hybrid histidine kinase.
 
 
0.979
AEI51397.1
Multi-sensor hybrid histidine kinase.
 
 
0.978
AEI49757.1
Multi-sensor hybrid histidine kinase.
  
 
 0.977
AEI49652.1
Multi-sensor hybrid histidine kinase.
  
 
 0.974
AEI47095.1
Histidine kinase.
 
 
0.967
AEI51819.1
Multi-sensor signal transduction histidine kinase.
 
 
0.960
AEI47416.1
Putative PAS/PAC sensor protein.
 
 
 0.955
AEI49817.1
Two component regulator propeller domain protein.
 
 
 0.948
AEI51729.1
Response regulator receiver sensor signal transduction histidine kinase.
 
 
0.933
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.