STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47618.1Two component transcriptional regulator, AraC family. (906 aa)    
Predicted Functional Partners:
AEI49491.1
Multi-sensor hybrid histidine kinase.
 
0.989
AEI49757.1
Multi-sensor hybrid histidine kinase.
 
 
0.966
AEI49999.1
ABC-type transporter, integral membrane subunit.
  
 0.966
AEI48656.1
Multi-sensor hybrid histidine kinase.
 
 
0.965
AEI51397.1
Multi-sensor hybrid histidine kinase.
 
 
0.964
AEI51819.1
Multi-sensor signal transduction histidine kinase.
 
 
0.964
AEI49652.1
Multi-sensor hybrid histidine kinase.
 
 
0.960
AEI49817.1
Two component regulator propeller domain protein.
 
 
 0.955
AEI51729.1
Response regulator receiver sensor signal transduction histidine kinase.
 
 
0.951
AEI49505.1
Response regulator receiver sensor signal transduction histidine kinase.
 
 
0.950
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.