STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47663.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
AEI47664.1
Hypothetical protein.
       0.773
AEI47662.1
Hypothetical protein.
       0.686
AEI47665.1
Hypothetical protein.
       0.678
AEI47666.1
Hypothetical protein.
       0.678
AEI47667.1
Hypothetical protein.
       0.678
AEI47668.1
Hypothetical protein.
       0.580
Runsl_1234
Hypothetical protein.
       0.457
AEI47669.1
Hypothetical protein.
       0.429
AEI47670.1
Hypothetical protein.
       0.429
AEI47671.1
SH3 type 3 domain protein.
       0.429
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.