STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47701.1Beta-ketoacyl-acyl-carrier-protein synthase III. (326 aa)    
Predicted Functional Partners:
Runsl_3923
tRNA-Gln.
 
 
 0.994
AEI47166.1
3-oxoacyl-(acyl-carrier-protein) synthase 2.
 
 
 0.993
AEI48199.1
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta.
 
 
 0.970
AEI50874.1
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha.
 
 
 0.964
AEI49084.1
acetyl-CoA carboxylase, biotin carboxyl carrier protein.
 
 
 0.960
AEI49083.1
acetyl-CoA carboxylase, biotin carboxylase.
 
 
 0.943
AEI51866.1
Citrate synthase I.
    
 0.817
AEI50528.1
3-oxoacyl-(acyl-carrier-protein) reductase.
 
 
 0.812
AEI46685.1
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase.
  
 
 0.810
AEI51223.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
   
 
 0.808
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.