STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47723.1Rieske (2Fe-2S) iron-sulfur domain protein. (324 aa)    
Predicted Functional Partners:
AEI47721.1
Hypothetical protein.
 
     0.819
AEI47722.1
Hypothetical protein.
 
     0.804
AEI47724.1
Hypothetical protein.
       0.618
AEI46894.1
Linalool 8-monooxygenase.
 
  
 0.545
AEI51890.1
Nitric oxide dioxygenase.
  
  
 0.538
AEI46923.1
Monooxygenase FAD-binding protein.
 
  
 0.498
AEI47720.1
TonB-dependent receptor plug.
       0.476
AEI46967.1
3-oxoacid CoA-transferase, B subunit.
     
 0.468
AEI46970.1
4-hydroxybenzoate 3-monooxygenase.
 
  
 0.462
AEI47719.1
Hypothetical protein.
       0.426
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.