STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47739.1Cell division protein FtsK/SpoIIIE. (844 aa)    
Predicted Functional Partners:
AEI51896.1
parB-like partition protein.
  
  
 0.809
AEI50856.1
Transcription-repair coupling factor.
 
   
 0.722
AEI51895.1
Cobyrinic acid ac-diamide synthase.
  
  
 0.721
AEI47738.1
Outer membrane lipoprotein carrier protein LolA.
 
  
 0.719
AEI48638.1
Tyrosine recombinase xerC.
 
   
 0.710
AEI51813.1
UDP-N-acetylglucosamine1- carboxyvinyltransferase.
 
   
 0.708
AEI48203.1
Hypothetical protein.
  
 
 0.699
AEI50104.1
Tyrosine recombinase xerC.
 
   
 0.690
AEI50274.1
Integrase family protein.
 
   
 0.670
AEI46461.1
Chromosomal replication initiator protein dnaA.
  
  
 0.668
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.