STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47780.1Ferritin Dps family protein. (155 aa)    
Predicted Functional Partners:
AEI46540.1
ATP-dependent Clp protease adaptor protein ClpS.
   
 
 0.870
AEI47779.1
OmpA/MotB domain protein.
  
   0.773
AEI50774.1
Peroxiredoxin, OsmC subfamily.
 
  
 0.752
AEI50342.1
Peroxidase.
  
  
 0.710
AEI47778.1
Hypothetical protein.
       0.709
AEI49160.1
Peroxiredoxin, Ohr subfamily.
  
  
 0.698
AEI47777.1
Hypothetical protein.
       0.694
AEI48707.1
Ribosomal subunit interface protein.
  
    0.680
AEI46463.1
Peptidoglycan-binding lysin domain protein.
   
  
 0.573
AEI47781.1
Hypothetical protein.
       0.473
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.