STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47785.1Response regulator receiver protein. (156 aa)    
Predicted Functional Partners:
AEI49000.1
Signal transduction histidine kinase with CheB and CheR activity.
 
 
 0.933
AEI47786.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
   0.913
AEI49652.1
Multi-sensor hybrid histidine kinase.
 
 
 0.898
AEI49491.1
Multi-sensor hybrid histidine kinase.
  
 
 0.891
AEI47414.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.880
AEI51397.1
Multi-sensor hybrid histidine kinase.
 
 
 0.871
AEI47618.1
Two component transcriptional regulator, AraC family.
 
 
 0.868
AEI47789.1
Integral membrane sensor signal transduction histidine kinase.
 
 
 0.867
AEI48656.1
Multi-sensor hybrid histidine kinase.
 
 
 0.867
AEI47784.1
Signal transduction histidine kinase, nitrogen specific, NtrB.
 
 
 0.864
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.