STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47786.1PAS/PAC sensor signal transduction histidine kinase. (528 aa)    
Predicted Functional Partners:
AEI47785.1
Response regulator receiver protein.
 
 
   0.916
AEI47790.1
Response regulator receiver protein.
 
 
   0.856
AEI47416.1
Putative PAS/PAC sensor protein.
 
 
 0.838
AEI47415.1
Response regulator receiver protein.
 
 
   0.809
AEI48999.1
Response regulator receiver protein.
 
 
   0.800
AEI47470.1
Response regulator receiver.
 
 
   0.798
AEI47787.1
Two component, sigma54 specific, transcriptional regulator, Fis family.
       0.789
AEI46741.1
Response regulator receiver protein.
 
     0.771
AEI50923.1
Response regulator receiver protein.
 
     0.770
AEI49495.1
Response regulator receiver protein.
 
   
 0.762
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.