STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47786.1PAS/PAC sensor signal transduction histidine kinase. (528 aa)    
Predicted Functional Partners:
AEI47785.1
Response regulator receiver protein.
 
 
   0.913
AEI47790.1
Response regulator receiver protein.
 
 
   0.850
AEI47416.1
Putative PAS/PAC sensor protein.
 
 
 0.827
AEI47415.1
Response regulator receiver protein.
 
 
   0.801
AEI48999.1
Response regulator receiver protein.
 
 
   0.792
AEI47470.1
Response regulator receiver.
 
 
   0.788
AEI47787.1
Two component, sigma54 specific, transcriptional regulator, Fis family.
       0.784
AEI46741.1
Response regulator receiver protein.
  
     0.771
AEI50923.1
Response regulator receiver protein.
 
     0.770
AEI49493.1
MCP methyltransferase, CheR-type.
      0.757
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.