STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47805.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
AEI51842.1
PDZ/DHR/GLGF domain protein.
  
     0.583
AEI47806.1
Hypothetical protein.
       0.557
AEI48234.1
Hypothetical protein.
  
     0.545
AEI46510.1
Hypothetical protein.
  
     0.539
AEI50824.1
Hypothetical protein.
  
     0.538
AEI50900.1
Tetratricopeptide TPR_1 repeat-containing protein.
  
     0.485
AEI49089.1
Protein of unknown function DUF177.
  
    0.477
AEI49430.1
Hypothetical protein.
  
     0.470
AEI50844.1
Hypothetical protein.
  
     0.431
AEI48331.1
Hypothetical protein.
  
     0.423
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.