STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47837.1Septum formation protein Maf. (192 aa)    
Predicted Functional Partners:
AEI49373.1
Cytidylate kinase.
 
  
  0.922
AEI46611.1
Multifunctional protein surE.
  
  
  0.911
AEI48787.1
Nucleoside diphosphate kinase.
    
  0.908
AEI49542.1
CTP synthase.
   
  0.906
AEI49735.1
Uracil phosphoribosyltransferase.
    
  0.903
AEI50490.1
5 nucleotidase deoxy cytosolic type C.
    
  0.903
AEI50882.1
Phosphoribosyltransferase.
    
  0.903
AEI48286.1
Uridine kinase.
    
  0.902
AEI47340.1
Thymidine kinase.
     
  0.900
AEI47497.1
Uridylate kinase.
     
  0.900
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.