STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47842.1Two component transcriptional regulator, winged helix family. (233 aa)    
Predicted Functional Partners:
AEI47955.1
Integral membrane sensor signal transduction histidine kinase.
 0.988
AEI48537.1
Integral membrane sensor signal transduction histidine kinase.
  0.979
AEI48626.1
Integral membrane sensor signal transduction histidine kinase.
 
  0.979
AEI50178.1
Integral membrane sensor signal transduction histidine kinase.
  0.978
AEI51397.1
Multi-sensor hybrid histidine kinase.
 
 
0.952
AEI48656.1
Multi-sensor hybrid histidine kinase.
 
0.936
AEI51622.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.861
AEI50804.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.856
AEI49652.1
Multi-sensor hybrid histidine kinase.
 
 
0.855
AEI50796.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.840
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.