STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47854.1MotA/TolQ/ExbB proton channel. (229 aa)    
Predicted Functional Partners:
AEI47853.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.991
AEI47868.1
Biopolymer transport protein ExbD/TolR.
  
 
 0.891
AEI47869.1
Biopolymer transport protein ExbD/TolR.
  
 
 0.891
AEI50890.1
Tetratricopeptide TPR_1 repeat-containing protein.
 
  
 0.800
AEI50208.1
Sulfate-transporting ATPase.
 
   
 0.776
AEI50893.1
Hypothetical protein.
 
 
 0.731
AEI47278.1
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase.
  
  
 0.727
AEI48555.1
Permease YjgP/YjgQ family protein.
  
     0.723
AEI49832.1
lipid-A-disaccharide synthase.
 
     0.699
AEI48773.1
Outer membrane protein assembly complex, YaeT protein.
  
   
 0.686
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.