STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47863.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
AEI47862.1
Hypothetical protein.
 
     0.790
AEI51127.1
Hypothetical protein.
  
     0.736
AEI47514.1
Hypothetical protein.
  
     0.718
Runsl_5229
Hypothetical protein.
  
     0.697
AEI48014.1
Hypothetical protein.
  
     0.689
AEI48224.1
Hypothetical protein.
  
     0.688
AEI49883.1
Gliding motility associated protein GldN.
  
     0.660
AEI49484.1
Hypothetical protein.
  
     0.658
AEI49564.1
Hypothetical protein.
  
     0.649
AEI47886.1
Hypothetical protein.
  
     0.635
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.