STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47946.1Glycosyl transferase family 2. (247 aa)    
Predicted Functional Partners:
AEI50318.1
Glycosyl transferase family 2.
  
  
 
0.925
AEI47878.1
Dolichyl-phosphate beta-D-mannosyltransferase.
  
  
 
0.923
AEI51708.1
Methyltransferase type 11.
 
    0.919
AEI47954.1
NAD-dependent epimerase/dehydratase.
 
    0.796
AEI48705.1
CDP-paratose 2-epimerase.
 
    0.777
AEI49260.1
Glycosyl transferase family 2.
  
     0.725
AEI47948.1
Glycosyl transferase family 2.
 
     0.624
AEI47949.1
Phytanoyl-CoA dioxygenase.
  
    0.554
AEI47953.1
Glycosyl transferase family 2.
 
     0.553
AEI47947.1
Glycosyl transferase family 2.
       0.551
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.