STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47953.1Glycosyl transferase family 2. (313 aa)    
Predicted Functional Partners:
AEI50359.1
Glycosyl transferase family 2.
 
     0.783
AEI50322.1
NAD-dependent epimerase/dehydratase.
  
    0.779
AEI49260.1
Glycosyl transferase family 2.
  
     0.773
AEI49219.1
Glycosyl transferase family 2.
  
     0.737
AEI50996.1
Glycosyl transferase family 2.
  
     0.711
AEI47952.1
Hypothetical protein.
       0.655
AEI47946.1
Glycosyl transferase family 2.
 
     0.553
AEI47954.1
NAD-dependent epimerase/dehydratase.
  
    0.528
AEI47951.1
Methyltransferase type 11.
  
    0.486
AEI47950.1
Hypothetical protein.
 
     0.447
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.