STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47976.1Transcriptional regulator, AraC family. (292 aa)    
Predicted Functional Partners:
AEI46970.1
4-hydroxybenzoate 3-monooxygenase.
 
   
 0.601
AEI47977.1
Alkylphosphonate utilization operon protein PhnA.
  
    0.584
AEI49503.1
Transcriptional regulator, AraC family.
  
   0.582
AEI47975.1
Hypothetical protein.
       0.539
AEI46971.1
3-oxoadipate enol-lactonase.
 
  
 0.537
AEI47968.1
PrpF protein.
 
     0.527
AEI51061.1
Transcriptional regulator, AraC family.
 
   0.525
AEI49502.1
Transcriptional regulator, AraC family.
  
   0.524
AEI49014.1
Transcriptional regulator with cupin sensor, AraC family.
  
   0.518
AEI49682.1
Transcriptional regulator, AraC family.
 
   0.490
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.